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Bioinformatics (Oxford, England)|December 29, 2022
DFinder: a novel end-to-end graph embedding-based method to identify drug-food interactionsTao Wang, Jinjin Yang, Yifu Xiao, et al.
Bioinformatics (Oxford, England)|June 13, 2022
MetBP: a software tool for detection of interaction between metal ion-RNA base pairsParthajit Roy, Dhananjay Bhattacharyya
Bioinformatics (Oxford, England)|May 31, 2022
Conditional generative modeling for de novo protein design with hierarchical functionsTim Kucera, Matteo Togninalli, Laetitia Meng-Papaxanthos
Bioinformatics (Oxford, England)|May 31, 2022
Globally Accessible Distributed Data Sharing (GADDS): a decentralized FAIR platform to facilitate data sharing in the life sciencesPavel Vazquez, Kayoko Hirayama-Shoji, Steffen Novik, et al.
Bioinformatics (Oxford, England)|May 31, 2022
Effector-GAN: prediction of fungal effector proteins based on pretrained deep representation learning methods and generative adversarial networksYansu Wang, Ximei Luo, Quan Zou
Bioinformatics (Oxford, England)|June 2, 2022
Spectral clustering of single-cell multi-omics data on multilayer graphsShuyi Zhang, Jacob R Leistico, Raymond J Cho, et al.
Bioinformatics (Oxford, England)|June 2, 2022
scGAD: single-cell gene associating domain scores for exploratory analysis of scHi-C dataSiqi Shen, Ye Zheng, Sündüz Keleş
Bioinformatics (Oxford, England)|June 8, 2022
meGPS: a multi-omics signature for hepatocellular carcinoma detection integrating methylome and transcriptome dataQiong Wu, Xubin Zheng, Kwong-Sak Leung, et al.
Bioinformatics (Oxford, England)|June 8, 2022
OverProt: secondary structure consensus for protein familiesAdam Midlik, Ivana Hutařová Vařeková, Jan Hutař, et al.
Bioinformatics (Oxford, England)|June 22, 2022
riboCleaner: a pipeline to identify and quantify rRNA read contamination from RNA-seq data in plantsPu Huang, Erin Davis, Xia Cao, et al.
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