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Bioinformatics Advances|July 28, 2026
Integrative multi-omics analysis identifies methylation-associated lncRNAs FAM83A-AS2 and AC012213.1 as candidate prognostic markers in lung adenocarcinomaSyed Muktadir Al Sium, Mahafujul Islam Quadery Tonmoy, Dhirendra Nath Barman, et al.Bioinformatics Advances|August 18, 2026
NitroGene: privacy-preserving collaborative genomic analysis using AWS nitro enclavesZakariya Ali, Arif HarmanciBioinformatics Advances|August 25, 2026
CNV-Finder: streamlining copy number variation discoveryNicole Kuznetsov, Kensuke Daida, Mary B Makarious, et al.Bioinformatics Advances|August 23, 2026
Machine-learning-based analysis of host-depleted k-mer profiles for early detection and abundance estimation of coffee pathogensSeunghyun Lim, Ezekiel Ahn, Dapeng Zhang, et al.Bioinformatics Advances|August 21, 2026
DiDyNet: a robust framework for differential dynamic network inference from longitudinal multi-omics dataZhe Liu, Kesong Wu, Taesung ParkBioinformatics Advances|September 8, 2026
Inductive bias influences the spatial scale of biological features learned from imagesJacob I Evarts, Jason Y Cain, Po-Hao Chiu, et al.Bioinformatics Advances|August 29, 2026
unsurv: clustering individualized survival curvesImad El BadisyBioinformatics Advances|September 10, 2026
NeuraGraph: a visual workflow framework for reproducible biomedical text mining with LLM-agentsLei Zhao, Changning Ren, Xinning Liu, et al.Bioinformatics Advances|September 1, 2026
survkl: an R package for transfer-learning-based integrated Cox modelsYubo Shao, Lingfeng Luo, Xiaohan Liu, et al.Bioinformatics Advances|September 12, 2026
Evaluating transformer-based models for structural characterization of orphan proteinsErcan Seçkin, Dominique Colinet, Etienne G J Danchin, et al.Pageof 116