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Bioinformatics Advances|January 6, 2025
LncLSTA: a versatile predictor unveiling subcellular localization of lncRNAs through long-short term attentionKai Wang, Yueming Hu, Sida Li, et al.
Bioinformatics Advances|March 11, 2025
BioModTool: from biomass composition data to structured biomass objective functions for genome-scale metabolic modelsClémence Dupont Thibert, Sylvaine Roy, Gilles Curien, et al.
Bioinformatics Advances|March 20, 2025
Drug target assessments: classifying target modulation and associated health effects using multi-level BERT-based classification modelsJennifer Venhorst, Gino Kalkman
Bioinformatics Advances|December 11, 2024
SpecGMM: Integrating Spectral analysis and Gaussian Mixture Models for taxonomic classification and identification of discriminative DNA regionsSaish Jaiswal, Hema A Murthy, Manikandan Narayanan
Bioinformatics Advances|December 11, 2024
Keeping it in the family: using protein family templates to rescue low confidence AlphaFold2 modelsFrancesco Costa, Matthias Blum, Alex Bateman
Bioinformatics Advances|November 7, 2024
mosGraphGen: a novel tool to generate multi-omics signaling graphs to facilitate integrative and interpretable graph AI model developmentHeming Zhang, Dekang Cao, Zirui Chen, et al.
Bioinformatics Advances|November 15, 2024
ProCogGraph: a graph-based mapping of cognate ligand domain interactionsMatthew Crown, Matthew Bashton
Bioinformatics Advances|November 4, 2024
TransAnnot-a fast transcriptome annotation pipelineMariia Zelenskaia, Yazhini Arangasamy, Milot Mirdita, et al.
Bioinformatics Advances|October 30, 2024
A modern multi-omics data exploration experience with PanomiconRodolfo S Allendes Osorio, Yuji Kosugi, Johan T Nyström-Persson, et al.
Bioinformatics Advances|August 12, 2024
ScyNet: Visualizing interactions in community metabolic modelsMichael Predl, Kilian Gandolf, Michael Hofer, et al.
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