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Bioinformatics Advances|April 22, 2025
GeneSetPheno: a web application for the integration, summary, and visualization of gene and variant-phenotype associations across gene setsJiru Han, Zachary F Gerring, Longfei Wang, et al.
Bioinformatics Advances|May 26, 2025
AnnSQL: a Python SQL-based package for fast large-scale single-cell genomics analysis using minimal computational resourcesKenny Pavan, Arpiar Saunders
Bioinformatics Advances|June 4, 2025
jdispatcher-viewers: interactive visualizations of sequence similarity search results and domain predictionsFábio Madeira, Joonheung Lee, Nandana Madhusoodanan, et al.
Bioinformatics Advances|May 21, 2025
Assessing accuracy and specificity of faecal source library for microbial source-tracking, using SourceTracker as case studyTimothy J Y Lim, Yussi M Palacios Delgado, Anna Lintern, et al.
Bioinformatics Advances|May 21, 2025
Benchmarking accelerated next-generation sequencing analysis pipelinesPubudu Saneth Samarakoon, Ghislain Fournous, Lars T Hansen, et al.
Bioinformatics Advances|May 14, 2025
A twin-tower model using MRI and gene for prediction on brain tumor patients' response to therapyQiyuan Lyu, Fumie Costen
Bioinformatics Advances|May 22, 2025
Enhancing gene set overrepresentation analysis with large language modelsJiqing Zhu, Rebecca Y Wang, Xiaoting Wang, et al.
Bioinformatics Advances|May 14, 2025
diel_models: a python package for systematic integration of day-night cycles into plant genome-scale metabolic modelsLuciana Martins, João Capela, Emanuel Cunha, et al.
Bioinformatics Advances|June 11, 2025
RNA knowledge-graph analysis through homogeneous embedding methodsFrancesco Torgano, Mauricio Soto Gomez, Matteo Zignani, et al.
Bioinformatics Advances|June 11, 2025
GAIN-BRCA: a graph-based AI-net framework for breast cancer subtype classification using multiomics dataJai Chand Patel, Sushil Kumar Shakyawar, Sahil Sethi, et al.
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