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Bioinformatics Advances|August 21, 2024
Introducing field-programmable gate arrays in genotype phasing and imputationLars Wienbrandt, David Ellinghaus
Bioinformatics Advances|August 12, 2024
Differentiable phylogenetics via hyperbolic embeddings with DodonaphyMatthew Macaulay, Mathieu Fourment
Bioinformatics Advances|August 1, 2024
survivalContour: visualizing predicted survival via colored contour plotsYushu Shi, Liangliang Zhang, Kim-Anh Do, et al.
Bioinformatics Advances|November 1, 2024
PatchProt: hydrophobic patch prediction using protein foundation modelsDea Gogishvili, Emmanuel Minois-Genin, Jan van Eck, et al.
Bioinformatics Advances|October 23, 2024
CAPTVRED: an automated pipeline for viral tracking and discovery from capture-based metagenomics samplesMaria Tarradas-Alemany, Sandra Martínez-Puchol, Cristina Mejías-Molina, et al.
Bioinformatics Advances|September 17, 2024
AlphaCRV: a pipeline for identifying accurate binder topologies in mass-modeling with AlphaFoldFrancisco J Guzmán-Vega, Stefan T Arold
Bioinformatics Advances|May 12, 2025
TRACKing tandem repeats: a customizable pipeline for identification and cross-species comparisonCarolina L Adam, Joana Rocha, Peter Sudmant, et al.
Bioinformatics Advances|May 21, 2025
bamSliceR: a Bioconductor package for rapid, cross-cohort variant and allelic bias analysisYizhou Peter Huang, Lauren Harmon, Eve Deering-Gardner, et al.
Bioinformatics Advances|May 26, 2025
GenePioneer: a comprehensive Python package for identification of essential genes and modules in cancerAmirhossein Haerianardakani, Golnaz Taheri
Bioinformatics Advances|May 23, 2025
iSEEtree: interactive explorer for hierarchical dataGiulio Benedetti, Ely Seraidarian, Theotime Pralas, et al.
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