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Bioinformatics Advances|July 7, 2025
UTRGAN: learning to generate 5' UTR sequences for optimized translation efficiency and gene expressionSina Barazandeh, Furkan Ozden, Ahmet Hincer, et al.Bioinformatics Advances|July 7, 2025
Leveraging generative AI to assist biocuration of medical actions for rare diseaseEnock Niyonkuru, J Harry Caufield, Leigh C Carmody, et al.Bioinformatics Advances|July 7, 2025
BoKDiff: best-of-K diffusion alignment for target-specific 3D molecule generationAli Khodabandeh Yalabadi, Mehdi Yazdani-Jahromi, Ozlem Ozmen GaribayBioinformatics Advances|July 15, 2025
K2R: Tinted de Bruijn graphs implementation for efficient read extraction from sequencing datasetsLéa Vandamme, Bastien Cazaux, Antoine LimassetBioinformatics Advances|July 2, 2025
Pharmacological assessment of Coffea arabica compounds as potential therapeutics for cervical cancerVictor Omoboyede, Nwachukwu Christiana Okonkwo, Jimoh Olayemi Balogun, et al.Bioinformatics Advances|January 12, 2026
Prompt-based bioinformatic pipeline generation for a multi-step metaviral workflowPengchong Ma, Haoze Zheng, Weijun Yi, et al.Bioinformatics Advances|January 9, 2026
Colony: a framework for reproducible and easy-to-use data analysis pipelines for biomedical research with singularity containersSebastian Eschner, Mohammad Alabdullah, Martin DugasBioinformatics Advances|January 9, 2026
Integrative analysis and imputation of multiple data streams via deep Gaussian processesAli A Septiandri, Deyu Ming, Francisco Alejandro DiazDelaO, et al.Bioinformatics Advances|December 22, 2025
Metadata harmonization from biological datasets with language modelsAlexander Verbitsky, Patrick Boutet, Mohammed EslamiBioinformatics Advances|December 16, 2025
geomeTriD: a Bioconductor package for interactive and integrative visualization of 3D structural model with multi-omics dataJianhong Ou, Kenneth D PossPageof 115