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Bioinformatics Advances|May 14, 2025
Optimizing gene selection and module identification via ontology-based scoring and deep learningBoutaina Ettetuani, Rajaa Chahboune, Ahmed Moussa
Bioinformatics Advances|May 14, 2025
iDDN: determining trans-omics network structure and rewiring with integrative differential dependency networksYizhi Wang, Yi Fu, Yingzhou Lu, et al.
Bioinformatics Advances|May 7, 2025
CellRomeR: an R package for clustering cell migration phenotypes from microscopy dataIivari Kleino, Mats Perk, António G G Sousa, et al.
Bioinformatics Advances|April 30, 2025
Construction of edit-distance graphs for large sets of short reads through minimizer-bucketingPengyao Ping, Jinyan Li
Bioinformatics Advances|March 31, 2025
RegionScan: a comprehensive R package for region-level genome-wide association testing with integration and visualization of multiple-variant and single-variant hypothesis testingMyriam Brossard, Delnaz Roshandel, Kexin Luo, et al.
Bioinformatics Advances|November 11, 2025
HeraNorm: an R shiny application for identifying optimal endogenous controls for miRNA and RNA assays in qPCR and ddPCRYao Hu, Xiaochun Xu, Yirong Shen, et al.
Bioinformatics Advances|October 31, 2025
Deconvolution and phylogeny inference of diverse variant types integrating bulk DNA-seq with single-cell RNA-seqNishat Anjum Bristy, Russell Schwartz
Bioinformatics Advances|August 13, 2025
Next generation biobanking ontology: introducing-omics contextual data to biobanking ontologyDalia Alghamdi, Damion M Dooley, Mannar Samman, et al.
Bioinformatics Advances|August 13, 2025
Enhancing genome-scale metabolic models with kinetic data: resolving growth and citramalate production trade-offs in Escherichia coliJorge Lázaro, Arin Wongprommoon, Jorge Júlvez, et al.
Bioinformatics Advances|August 13, 2025
Recent computational advances in the identification of cryptic binding sites for drug discoveryDorota Gašparíková, Rupesh Chikhale, Jason Cole, et al.
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