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Bioinformatics Advances|August 1, 2025
MEAanalysis: an open-source R package for downstream visualization of AxIS navigator multi-electrode array burst data at the single-electrode levelEmily A Gordon, David L Bennett, Georgios Baskozos, et al.Bioinformatics Advances|July 25, 2025
ABCFold: easier running and comparison of AlphaFold 3, Boltz-1, and Chai-1Luc G Elliott, Adam J Simpkin, Daniel J RigdenBioinformatics Advances|January 26, 2023
CoDe: a web-based tool for codon deoptimizationDivya Sharma, Tracey Baas, Aitor Nogales, et al.Bioinformatics Advances|January 26, 2023
GlobeCorr: interactive globe-based visualization for correlation datasetsMariam Arab, Nolan Woods, Emma S Garlock, et al.Bioinformatics Advances|January 26, 2023
scMEGA: single-cell multi-omic enhancer-based gene regulatory network inferenceZhijian Li, James S Nagai, Christoph Kuppe, et al.Bioinformatics Advances|January 26, 2023
Synaptome.db: a bioconductor package for synaptic proteomics dataOksana Sorokina, Anatoly Sorokin, J Douglas ArmstrongBioinformatics Advances|January 26, 2023
A toolkit for covalent docking with GOLD: from automated ligand preparation with KNIME to bound protein-ligand complexesLaurianne David, Anissa Mdahoma, Natesh Singh, et al.Bioinformatics Advances|January 26, 2023
Gilda: biomedical entity text normalization with machine-learned disambiguation as a serviceBenjamin M Gyori, Charles Tapley Hoyt, Albert SteppiBioinformatics Advances|January 26, 2023
AbAdapt: an adaptive approach to predicting antibody-antigen complex structures from sequenceAna Davila, Zichang Xu, Songling Li, et al.Bioinformatics Advances|January 26, 2023
GPU-accelerated and pipelined methylation callingYilin Feng, Gulsum Gudukbay Akbulut, Xulong Tang, et al.Pageof 115