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Bioinformatics Advances|July 19, 2024
Network depth affects inference of gene sets from bacterial transcriptomes using denoising autoencodersWillow Kion-Crosby, Lars Barquist
Bioinformatics Advances|July 19, 2024
Correction to: Quantitative transcriptomic and epigenomic data analysis: a primer
Bioinformatics Advances|August 14, 2024
Evolution and subfamilies of HERVL human endogenous retrovirusHuan Zhang, Martin C Frith
Bioinformatics Advances|August 15, 2024
Current and future directions in network biologyMarinka Zitnik, Michelle M Li, Aydin Wells, et al.
Bioinformatics Advances|August 12, 2024
A Bayesian model for genomic prediction using metabolic networksAkio Onogi
Bioinformatics Advances|August 26, 2024
In the twilight zone of protein sequence homology: do protein language models learn protein structure?Anowarul Kabir, Asher Moldwin, Yana Bromberg, et al.
Bioinformatics Advances|August 23, 2024
Understanding the natural language of DNA using encoder-decoder foundation models with byte-level precisionAditya Malusare, Harish Kothandaraman, Dipesh Tamboli, et al.
Bioinformatics Advances|June 19, 2024
Hapsolutely: a user-friendly tool integrating haplotype phasing, network construction, and haploweb calculationMiguel Vences, Stefanos Patmanidis, Jan-Christopher Schmidt, et al.
Bioinformatics Advances|April 29, 2024
FlexStat: combinatory differentially expressed protein extractionSenuri De Silva, Asfa Alli-Shaik, Jayantha Gunaratne
Bioinformatics Advances|June 3, 2024
Uncover spatially informed variations for single-cell spatial transcriptomics with STewNanxi Guo, Juan Vargas, Samantha Reynoso, et al.
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