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Bioinformatics Advances|November 18, 2025
ICCTax: a hierarchical taxonomic classifier for metagenomic sequences on a large language modelYichun Gao, Jiaxing Bai, Feng Zhou, et al.
Bioinformatics Advances|November 27, 2025
MutSeqR: an open source R package for standardized analysis of error-corrected next-generation sequencing data in genetic toxicologyAnnette E Dodge, Andrew Williams, Danielle P M LeBlanc, et al.
Bioinformatics Advances|December 24, 2024
Joint extraction of entity and relation based on fine-tuning BERT for long biomedical literaturesTing Gao, Xue Zhai, Chuan Yang, et al.
Bioinformatics Advances|January 13, 2025
QOMIC: quantum optimization for motif identificationHoang M Ngo, Tamim Khatib, My T Thai, et al.
Bioinformatics Advances|January 8, 2025
Genal: a Python toolkit for genetic risk scoring and Mendelian randomizationCyprien A Rivier, Santiago Clocchiatti-Tuozzo, Shufan Huo, et al.
Bioinformatics Advances|February 3, 2025
Sphae: an automated toolkit for predicting phage therapy candidates from sequencing dataBhavya Papudeshi, Michael J Roach, Vijini Mallawaarachchi, et al.
Bioinformatics Advances|February 3, 2025
A comparative analysis of gene expression profiling by statistical and machine learning approachesMyriam Bontonou, Anaïs Haget, Maria Boulougouri, et al.
Bioinformatics Advances|February 10, 2025
Queer voices in computational biology: the first ISCB LGBTQI+ SymposiumR Gonzalo Parra, Mark N Wass, Seth Munholland, et al.
Bioinformatics Advances|December 30, 2024
SurfR: Riding the wave of RNA-seq data with a comprehensive bioconductor package to identify surface protein-coding genesAurora Maurizio, Anna Sofia Tascini, Marco J Morelli
Bioinformatics Advances|December 30, 2024
SeqLengthPlot v2.0: an all-in-one, easy-to-use tool for visualizing and retrieving sequence lengths from FASTA filesDany Domínguez-Pérez, Guillermin Agüero-Chapin, Serena Leone, et al.
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