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Briefings in Bioinformatics|March 30, 2024
DNA Bloom Filter enables anti-contamination and file version control for DNA-based data storageYiming Li, Haoling Zhang, Yuxin Chen, et al.
Briefings in Bioinformatics|April 1, 2024
SpatialcoGCN: deconvolution and spatial information-aware simulation of spatial transcriptomics data via deep graph co-embeddingWang Yin, You Wan, Yuan Zhou
Briefings in Bioinformatics|April 1, 2024
Leveraging multi-omics data to empower quantitative systems pharmacology in immuno-oncologyTheinmozhi Arulraj, Hanwen Wang, Alberto Ippolito, et al.
Briefings in Bioinformatics|March 30, 2024
D3EGFR: a webserver for deep learning-guided drug sensitivity prediction and drug response information retrieval for EGFR mutation-driven lung cancerYulong Shi, Chongwu Li, Xinben Zhang, et al.
Briefings in Bioinformatics|September 15, 2023
Inferring single-cell gene regulatory network by non-redundant mutual informationYanping Zeng, Yongxin He, Ruiqing Zheng, et al.
Briefings in Bioinformatics|August 31, 2023
SnapHiC-D: a computational pipeline to identify differential chromatin contacts from single-cell Hi-C dataLindsay Lee, Miao Yu, Xiaoqi Li, et al.
Briefings in Bioinformatics|August 31, 2023
Sequence pre-training-based graph neural network for predicting lncRNA-miRNA associationsZixiao Wang, Shiyang Liang, Siwei Liu, et al.
Briefings in Bioinformatics|August 29, 2023
DeepICSH: a complex deep learning framework for identifying cell-specific silencers and their strength from the human genomeTianjiao Zhang, Liangyu Li, Hailong Sun, et al.
Briefings in Bioinformatics|August 20, 2023
ETLD: an encoder-transformation layer-decoder architecture for protein contact and mutation effects predictionHe Wang, Yongjian Zang, Ying Kang, et al.
Briefings in Bioinformatics|August 17, 2023
NCAE: data-driven representations using a deep network-coherent DNA methylation autoencoder identify robust disease and risk factor signaturesDavid Martínez-Enguita, Sanjiv K Dwivedi, Rebecka Jörnsten, et al.
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