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Briefings in Bioinformatics|April 6, 2024
PUTransGCN: identification of piRNA-disease associations based on attention encoding graph convolutional network and positive unlabelled learningQiuhao Chen, Liyuan Zhang, Yaojia Liu, et al.
Briefings in Bioinformatics|February 22, 2024
ADH-Enhancer: an attention-based deep hybrid framework for enhancer identification and strength predictionFaiza Mehmood, Shazia Arshad, Muhammad Shoaib
Briefings in Bioinformatics|February 22, 2024
CRISPR-DIPOFF: an interpretable deep learning approach for CRISPR Cas-9 off-target predictionMd Toufikuzzaman, Md Abul Hassan Samee, M Sohel Rahman
Briefings in Bioinformatics|February 22, 2024
ABAG-docking benchmark: a non-redundant structure benchmark dataset for antibody-antigen computational dockingNan Zhao, Bingqing Han, Cuicui Zhao, et al.
Briefings in Bioinformatics|February 22, 2024
STW-MD: a novel spatio-temporal weighting and multi-step decision tree method for considering spatial heterogeneity in brain gene expression dataShanjun Mao, Xiao Huang, Runjiu Chen, et al.
Briefings in Bioinformatics|February 22, 2024
A comprehensive computational benchmark for evaluating deep learning-based protein function prediction approachesWenkang Wang, Yunyan Shuai, Qiurong Yang, et al.
Briefings in Bioinformatics|February 1, 2024
scMMT: a multi-use deep learning approach for cell annotation, protein prediction and embedding in single-cell RNA-seq dataSongqi Zhou, Yang Li, Wenyuan Wu, et al.
Briefings in Bioinformatics|February 2, 2024
Deqformer: high-definition and scalable deep learning probe design methodYantong Cai, Jia Lv, Rui Li, et al.
Briefings in Bioinformatics|February 2, 2024
Structure prediction of linear and cyclic peptides using CABS-flexAleksandra Badaczewska-Dawid, Karol Wróblewski, Mateusz Kurcinski, et al.
Briefings in Bioinformatics|February 7, 2024
Integrative open workflow for confident annotation and molecular networking of metabolomics MSE/DIA dataAlbert Katchborian-Neto, Matheus F Alves, Paula C P Bueno, et al.
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