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Briefings in Bioinformatics|April 28, 2024
scBOL: a universal cell type identification framework for single-cell and spatial transcriptomics dataYuyao Zhai, Liang Chen, Minghua DengBriefings in Bioinformatics|April 23, 2024
Single-cell multi-omics analysis identifies context-specific gene regulatory gates and mechanismsSeyed Amir Malekpour, Laleh Haghverdi, Mehdi SadeghiBriefings in Bioinformatics|November 17, 2023
Chemical structure-aware molecular image representation learningHongxin Xiang, Shuting Jin, Xiangrong Liu, et al.Briefings in Bioinformatics|November 20, 2023
Demographic confounders distort inference of gene regulatory and gene co-expression networks in cancerAnna Ketteler, David B BlumenthalBriefings in Bioinformatics|October 14, 2023
SGAE: single-cell gene association entropy for revealing critical states of cell transitions during embryonic developmentJiayuan Zhong, Chongyin Han, Pei Chen, et al.Briefings in Bioinformatics|October 5, 2023
A practical assembly guideline for genomes with various levels of heterozygosityTakako Mochizuki, Mika Sakamoto, Yasuhiro Tanizawa, et al.Briefings in Bioinformatics|October 2, 2023
ScSmOP: a universal computational pipeline for single-cell single-molecule multiomics data analysisKai Jing, Yewen Xu, Yang Yang, et al.Briefings in Bioinformatics|September 24, 2023
PTBGRP: predicting phage-bacteria interactions with graph representation learning on microbial heterogeneous information networkJie Pan, Zhuhong You, Wencai You, et al.Briefings in Bioinformatics|September 22, 2023
COWID: an efficient cloud-based genomics workflow for scalable identification of SARS-COV-2Hendrick Gao-Min Lim, Yang C Fann, Yuan-Chii Gladys LeeBriefings in Bioinformatics|October 2, 2023
Spatom: a graph neural network for structure-based protein-protein interaction site predictionHaonan Wu, Jiyun Han, Shizhuo Zhang, et al.Pageof 540