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Briefings in Bioinformatics|June 14, 2026
Reply to "Letter to the editor: methodological considerations in the benchmarking of AI-based protein-aptamer complex prediction"Jiani Zhao, Kha Tram, Hongbin Yan, et al.
Briefings in Bioinformatics|June 17, 2026
Current trends and challenges in deciphering single molecule resolution maps of single cell transcriptomesDavid Schaeper, Upol Chowdhury, Sarath Chandra Janga
Briefings in Bioinformatics|June 16, 2026
Empowering multifaceted analysis of spatial transcriptomics data with RGASTYuqiao Gong, Xin Yuan, Zhangsheng Yu
Briefings in Bioinformatics|June 17, 2026
DeepPTMPred: a multi-modal deep learning framework for accurate prediction of protein post-translational modification sitesChenkui Wang, Qianhui Jiang, Dan Yu, et al.
Briefings in Bioinformatics|June 6, 2018
In silico clinical trials: concepts and early adoptionsFrancesco Pappalardo, Giulia Russo, Flora Musuamba Tshinanu, et al.
Briefings in Bioinformatics|August 23, 2022
CRISPRCasStack: a stacking strategy-based ensemble learning framework for accurate identification of Cas proteinsTianjiao Zhang, Yuran Jia, Hongfei Li, et al.
Briefings in Bioinformatics|June 4, 2021
iAMP-CA2L: a new CNN-BiLSTM-SVM classifier based on cellular automata image for identifying antimicrobial peptides and their functional typesXuan Xiao, Yu-Tao Shao, Xiang Cheng, et al.
Briefings in Bioinformatics|July 8, 2026
SOPA and SIMPA: normalized single-sample integrated multiomics pathway analysis of tumor heterogeneity in solid cancersHasan Alsharoh, Abdulrahman Ismaiel, George A Calin, et al.
Briefings in Bioinformatics|July 8, 2026
Investigating the anticancer activity of eravacycline in pancreatic cancer via target-based deep learning and experimental validationAdi Jabarin, Guy Shtar, Valeria Feinshtein, et al.
Briefings in Bioinformatics|June 24, 2026
scTumorDrug: predicting cell-type-specific drug responses for heterogeneous tumorsQiang Zhang, Qing Zhang, Chunming Guo, et al.
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