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Briefings in Bioinformatics|September 28, 2026
ST-ConMa: a multimodal foundation framework for spatial transcriptomics via image-gene contrastive and matching learningTaelim Yeom, Dongha Choi, Hyunju LeeBriefings in Bioinformatics|September 28, 2026
Data-driven identification of cell subtypes for single-cell transcriptomic data with SubtypistYue Yao, Xin Shao, Renjie Chen, et al.Briefings in Bioinformatics|October 7, 2026
ToxMamba: a novel method for toxic peptide prediction based on the fusion of pretrained embeddings and multi-scale state space modelsJingya Fang, Wenqi Shen, Yanru Li, et al.Briefings in Bioinformatics|October 11, 2026
From conservation scores to language models: a feature engineering perspective on machine learning for genetic variant interpretationMatteo Bulloni, Martina Vescio, Federico De Mori Bajolin, et al.Briefings in Bioinformatics|October 9, 2026
InstructPLM-mu: protein fitness prediction from structure instructionsJunde Xu, Yapin Shi, Lijun Lang, et al.Briefings in Bioinformatics|October 8, 2026
EPBAM: annotation-robust detection of alternative splicing events and a systematic benchmarking of current toolsCesar Lobato-Fernandez, Laura Jareno, Angel Rubio, et al.Briefings in Bioinformatics|October 8, 2026
Integrative machine learning approaches for enzyme kinetic parameter predictionRui Zhou, Wenhui Xi, Peng Yin, et al.Briefings in Bioinformatics|October 8, 2026
HESTIA: scalable multimodal integration of histology and high-resolution spatial Transcriptomics for robust spatial domain identificationZheng Zhong, Xiaoyu Zhu, Jing Guo, et al.Briefings in Bioinformatics|October 18, 2026
UcTCRp: a TCRβ-based framework for identifying and profiling MAIT- and iNKT-associated repertoire signalsLinlin Chen, Yueyi Li, Shiwen Shan, et al.Briefings in Bioinformatics|October 19, 2026
Ribo-seq rRNA reads reveal co-predicted signatures of ribosome heterogeneity and collisionsEdwin S Kyei-Baffour, William J Faller, Ferhat AlkanPageof 555