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Briefings in Bioinformatics|June 8, 2025
TARGET-SL: precision essential gene prediction using driver prioritisation and synthetic lethalityRhys Gillman, Matt A Field, Ulf Schmitz, et al.
Briefings in Bioinformatics|May 12, 2025
High-dimensional mediation analysis for longitudinal mediators and survival outcomesLili Liu, Haixiang Zhang, Yinan Zheng, et al.
Briefings in Bioinformatics|May 8, 2025
Systematic evaluation of normalization approaches in tandem mass tag and label-free protein quantification data using PRONELis Arend, Klaudia Adamowicz, Johannes R Schmidt, et al.
Briefings in Bioinformatics|May 9, 2025
A novel splicing graph allows a direct comparison between exon-based and splice junction-based approaches to alternative splicing detectionJelard Aquino, Daniel Witoslawski, Steve Park, et al.
Briefings in Bioinformatics|August 21, 2025
STINGAllo: a web server for high-throughput prediction of allosteric site-forming residues using internal protein nanoenvironment descriptorsFolorunsho Bright Omage, José Augusto Salim, Ivan Mazoni, et al.
Briefings in Bioinformatics|February 13, 2026
3D reconstruction of spatial transcriptomics with spatial pattern enhanced graph convolutional neural networkChen Tang, Yuansheng Zhou, Xue Xiao, et al.
Briefings in Bioinformatics|February 13, 2026
NanoPrePro: a fully equipped, fast, and memory-efficient preprocessor for nanopore transcriptomic sequencingChia-Chen Chu, Jhong-He Yu, Shang-Che Kuo, et al.
Briefings in Bioinformatics|February 10, 2026
Bayesian multi-cell type models for the analysis of complex immune cell populations with application to ovarian cancerChase J Sakitis, Jose Laborde, Julia Wrobel, et al.
Briefings in Bioinformatics|February 9, 2026
Harnessing AI to fuse phenotypic signatures for drug target identification: progress in computational modelingFengming Chen, Ranran Zhao, Xingxing Han, et al.
Briefings in Bioinformatics|February 9, 2026
Transfer learning-based two-sample Mendelian randomization method for heterogeneous populationYun Wei, Hao Chen, Xinhui Liu, et al.
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