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Briefings in Bioinformatics|July 28, 2025
A conceptual framework for human-AI collaborative genome annotationXiaomei Li, Alex Whan, Meredith McNeil, et al.
Briefings in Bioinformatics|May 2, 2025
PSTP: accurate residue-level phase separation prediction using protein conformational and language model embeddingsMofan Feng, Liangjie Liu, Zhuo-Ning Xian, et al.
Briefings in Bioinformatics|May 2, 2025
Metabolism-associated protein network constructing and host-directed anti-influenza drug repurposingHao Tang, Feng Jiang, Zhi Zhang, et al.
Briefings in Bioinformatics|May 2, 2025
Chrombus-XMBD: a graph convolution model predicting 3D-genome from chromatin featuresYuanyuan Zeng, Zhiyu You, Jiayang Guo, et al.
Briefings in Bioinformatics|May 9, 2025
SVHunter: long-read-based structural variation detection through the transformer modelRuntian Gao, Heng Hu, Zhongjun Jiang, et al.
Briefings in Bioinformatics|April 26, 2025
Deep learning in GPCR drug discovery: benchmarking the path to accurate peptide bindingLuuk R Hoegen Dijkhof, Teemu K E Rönkkö, Hans C von Vegesack, et al.
Briefings in Bioinformatics|October 27, 2025
scDETECT: a novel statistical model accounting for cell type correlation in single-cell RNA-seq differential expression analysisYuhan Xu, Weiwei Zhang, Hao Wu
Briefings in Bioinformatics|November 8, 2025
Systematic evaluation of de novo mutation calling tools using whole genome sequencing dataAnushi Shah, Steven Monger, Michael Troup, et al.
Briefings in Bioinformatics|November 9, 2025
SAGE-prot: scoring-assisted generative exploration for multi-objective protein designHocheol Lim, Geon-Ho Lee, Hyein Cho, et al.
Briefings in Bioinformatics|November 2, 2025
Deep learning approaches for resolving genomic discrepancies in cancer: a systematic review and clinical perspectiveMuhammad Zubair, Ali Haider Khan, Syed Fakhar Bilal, et al.
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