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Briefings in Bioinformatics|October 4, 2025
Predicting disease associations based on the higher order structure of ceRNA networksZhaoliang Chai, Ying Su, Xuecong Tian, et al.Briefings in Bioinformatics|September 28, 2025
A novel pairwise sequence alignment algorithm for similarity search in massive datasetsYosef Masoudi-Sobhanzadeh, Yadollah OmidiBriefings in Bioinformatics|September 29, 2025
soFusion: facilitating tissue structure identification via spatial multi-omics data fusionNa Yu, Wenrui Li, Xue Sun, et al.Briefings in Bioinformatics|September 8, 2025
TMBquant: an explainable AI-powered caller advancing tumor mutation burden quantification across heterogeneous samplesShenjie Wang, Xiaonan Wang, Xiaoyan Zhu, et al.Briefings in Bioinformatics|August 19, 2025
Indel calling from ONT sequencing data of family trios via sparse attention and 3D convolutionYing Shi, Chenxu Wu, Shifu Luo, et al.Briefings in Bioinformatics|August 18, 2025
Reg2ST: recognizing potential patterns from gene expression for spatial transcriptomics predictionXu Wang, Yaqiu Wang, Xuan Wang, et al.Briefings in Bioinformatics|August 16, 2025
AutoMethyc: an automated methylation analysis for massively parallel sequencing dataFernando Ambriz-Barrera, Miguel Ruiz-De La Cruz, Héctor Martínez-Gregorio, et al.Briefings in Bioinformatics|August 12, 2025
PanThera: predictive analysis of higher-order combination therapies using deep neural networksPedro A Campana, Paul Prasse, Ralf Herwig, et al.Briefings in Bioinformatics|August 12, 2025
Towards machine learning fairness in classifying multicategory causes of deaths in colorectal or lung cancer patientsCatherine H Feng, Fei Deng, Mary L Disis, et al.Briefings in Bioinformatics|September 7, 2025
Energy entropy vector: a novel approach for efficient microbial genomic sequence analysis and classificationHao Wang, Guoqing Hu, Stephen S-T YauPageof 544