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Briefings in Bioinformatics|June 12, 2025
Gene expression inference based on graph neural networks using L1000 dataTae Hyun Kim, Harim Kim, Hyunjin Hwang, et al.Briefings in Bioinformatics|June 19, 2025
GC-balanced polar codes correcting insertions, deletions and substitutions for DNA storageRui Zhang, Huaming WuBriefings in Bioinformatics|June 16, 2025
VirulentHunter: deep learning-based virulence factor predictor illuminates pathogenicity in diverse microbial contextsChen Chen, Yong Xu, Jian Ouyang, et al.Briefings in Bioinformatics|June 12, 2025
Robustness and resilience of computational deconvolution methods for bulk RNA sequencing dataSu Xu, Duan Chen, Xue Wang, et al.Briefings in Bioinformatics|July 17, 2025
Impact of halogenation on scaffold toxicity assessed using HD-GEM machine learning modelBharath Reddy Boya, Jin-Hyung Lee, Jae-Mun Choi, et al.Briefings in Bioinformatics|July 10, 2025
AttenRNA: multi-scale deep attentive model with RNA feature variability analysisJing Li, Quan Zou, Chao ZhanBriefings in Bioinformatics|June 23, 2025
Graph-RPI: predicting RNA-protein interactions via graph autoencoder and self-supervised learning strategiesJiahui Guan, Lantian Yao, Peilin Xie, et al.Briefings in Bioinformatics|June 19, 2025
A novel deep learning framework with dynamic tokenization for identifying chromatin interactions along with motif importance investigationLiangcan Li, Xin Li, Hao WuBriefings in Bioinformatics|June 19, 2025
Advances and challenges in cell-cell communication inference: a comprehensive review of tools, resources, and future directionsGiulia Cesaro, James Shiniti Nagai, Nicolò Gnoato, et al.Briefings in Bioinformatics|June 17, 2025
2OM-Pred: prediction of 2-O-methylation sites in ribonucleic acid using diverse classifiersAnas Bilal, Muhammad Taseer Suleman, Khalid Almohammadi, et al.Pageof 556