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Briefings in Bioinformatics|September 18, 2025
CircCode3: integrating deep learning to mine and evaluate translatable circular RNAs from ribosome profiling sequencing and mass spectrometry dataZonghui Zhu, Xiaojuan Liang, Rui Ma, et al.
Briefings in Bioinformatics|September 18, 2025
Transfer learning reveals the mediating mechanisms of cross-ethnic lipid metabolic pathways in the association between APOE gene and Alzheimer's diseaseLulu Pan, Yahang Liu, Chen Huang, et al.
Briefings in Bioinformatics|September 23, 2025
MINERVA-microbiome network research and visualization atlas: a scalable knowledge graph for mapping microbiome-disease associationsSaul Langarica, Young-Tak Kim, Adham Alkhadrawi, et al.
Briefings in Bioinformatics|August 12, 2025
Genetic/epigenetic DNA markers for linking suspects and tissues in complex crime scenesRoy Mizrachi, Daniel Neiman, Jonathan Rosenski, et al.
Briefings in Bioinformatics|August 12, 2025
Prediction of liquid-phase separation proteins using Siamese network with feature fusionYe-Hong Yang, Qun Liu, Jiang-Feng Liu, et al.
Briefings in Bioinformatics|August 15, 2025
Pushing the boundaries of few-shot learning for low-data drug discovery with a Bayesian meta-learning hypernetwork frameworkJiacai Yi, Dejun Jiang, Chengkun Wu, et al.
Briefings in Bioinformatics|August 13, 2025
A comparative evaluation of computational models for RNA modification detection using nanopore sequencing with RNA004 chemistryYongji Zou, Mian Umair Ahsan, Joe Chan, et al.
Briefings in Bioinformatics|August 12, 2025
DiffusionST: a deep generative diffusion model-based framework for enhancing spatial transcriptomics data quality and identifying spatial domainsYaxuan Cui, Yang Cui, Ruheng Wang, et al.
Briefings in Bioinformatics|August 12, 2025
Single-cell differential expression analysis between conditions within nested settingsLeon Hafner, Gregor Sturm, Sarah Lumpp, et al.
Briefings in Bioinformatics|August 12, 2025
On the impact of local protein structure features on prediction of major histocompatibility complex class I and II antigen presentationYat-Tsai Richie Wan, Morten Nielsen
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