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Briefings in Bioinformatics|September 7, 2025
DeepMobilome: predicting mobile genetic elements using sequencing reads of microbiomesYouna Cho, Erin Kim, Minyoung Kim, et al.
Briefings in Bioinformatics|September 18, 2025
abCAN: a practical and novel attention network for predicting mutant antibody affinityChen Gong, Nan Weng, Hongjia Liu, et al.
Briefings in Bioinformatics|September 8, 2025
Graph neural network integrated with pretrained protein language model for predicting human-virus protein-protein interactionsLinyang Jiang, Xiaodi Yang, Xiaokun Guo, et al.
Briefings in Bioinformatics|October 27, 2025
Kinship Decouple and Phenotype Selection (KDPS): a tool for phenotype-aware decoupling of related subjectsWanjun Gu, Jiachen Xi, Steven Cao, et al.
Briefings in Bioinformatics|October 26, 2025
CASTER-DTA: equivariant graph neural networks for predicting drug-target affinityRachit Kumar, Joseph D Romano, Marylyn D Ritchie
Briefings in Bioinformatics|October 27, 2025
Dual-route embedding-aware graph neural networks for drug repositioningYanlong Zhao, Yixiao Chen, Jiawen Du, et al.
Briefings in Bioinformatics|October 26, 2025
Spatial transcriptomics: a bibliometric analysis with large language model on English literaturesHuiyang Li, Haixiao Wu, Wenjuan Ma, et al.
Briefings in Bioinformatics|October 17, 2025
Pepxml: ESM2-based extreme multilabel classification of pathogen-targeted antimicrobial peptidesYannan Bin, Daijun Zhang, Zhiyang Hu, et al.
Briefings in Bioinformatics|October 15, 2025
MRDadaptis: self-adaptive parameter configuration enhances minimal residual disease detection in heterogeneous ctDNA samplesTianci Wang, Xin Lai, Shenjie Wang, et al.
Briefings in Bioinformatics|August 1, 2025
NeuroFANN: identification of neuropathological subtypes in dementia with plasma proteins by using functionally annotated neural networkSunghong Park, Doyoon Kim, Ji-Hye Choi, et al.
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