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Briefings in Bioinformatics|February 10, 2025
B-Lightning: using bait genes for marker gene hunting in single-cell data with complex heterogeneityYiren Shao, Qi Gao, Liuyang Wang, et al.Briefings in Bioinformatics|February 5, 2025
DeepPFP: a multi-task-aware architecture for protein function predictionHan Wang, Zilin Ren, Jinghong Sun, et al.Briefings in Bioinformatics|February 6, 2025
Post-transcriptional regulation supports the homeostatic expression of mature RNAZheng Su, Mingyan Fang, Andrei Smolnikov, et al.Briefings in Bioinformatics|February 3, 2025
Multi-view multi-level contrastive graph convolutional network for cancer subtyping on multi-omics dataBo Yang, Chenxi Cui, Meng Wang, et al.Briefings in Bioinformatics|January 24, 2025
Complex hierarchical structures analysis in single-cell data with Poincaré deep manifold transformationYongjie Xu, Zelin Zang, Bozhen Hu, et al.Briefings in Bioinformatics|January 24, 2025
Deep learning-based design and experimental validation of a medicine-like human antibody libraryNandhini Rajagopal, Udit Choudhary, Kenny Tsang, et al.Briefings in Bioinformatics|January 30, 2025
Attention-aware differential learning for predicting peptide-MHC class I binding and T cell receptor recognitionRui Niu, Jingwei Wang, Yanli Li, et al.Briefings in Bioinformatics|January 30, 2025
Graph contrastive learning of subcellular-resolution spatial transcriptomics improves cell type annotation and reveals critical molecular pathwaysQiaolin Lu, Jiayuan Ding, Lingxiao Li, et al.Briefings in Bioinformatics|February 23, 2025
Do protein language models learn phylogeny?Sanjana Tule, Gabriel Foley, Mikael BodénBriefings in Bioinformatics|March 17, 2025
Pragmatic soft-decision data readout of encoded large DNAQi Ge, Rui Qin, Shuang Liu, et al.Pageof 540