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Gigascience|June 23, 2025
Extraction of biological terms using large language models enhances the usability of metadata in the BioSample databaseShuya Ikeda, Zhaonan Zou, Hidemasa Bono, et al.
Gigascience|September 26, 2025
PathoGFAIR: a collection of FAIR and adaptable (meta)genomics workflows for (foodborne) pathogens detection and trackingEngy Nasr, Anna Henger, Björn Grüning, et al.
Gigascience|September 19, 2025
Haplotype-resolved reference genomes of the sea turtle clade unveil ultra-syntenic genomes with hotspots of divergenceLarissa S Arantes, Tom Brown, Diego De Panis, et al.
Gigascience|May 16, 2025
A large collection of bioinformatics question-query pairs over federated knowledge graphs: methodology and applicationsJerven Bolleman, Vincent Emonet, Adrian Altenhoff, et al.
Gigascience|May 16, 2025
Chromosome-scale assemblies of three Ormosia species: repetitive sequences distribution and structural rearrangementZheng-Feng Wang, En-Ping Yu, Lin Fu, et al.
Gigascience|May 19, 2025
Deterministic succession patterns in the rumen and fecal microbiome associate with host metabolic shifts in peripartum dairy cattleShuo Wang, Fanlin Kong, Dongwen Dai, et al.
Gigascience|May 19, 2025
Multiomics analysis of umbilical cord hematopoietic stem cells from a multiethnic cohort of Hawaii reveals the intergenerational effect of maternal prepregnancy obesity and risks for cancersYuheng Du, Paula A Benny, Yuchen Shao, et al.
Gigascience|July 28, 2025
Reducing skin microbiome exposure impacts through swine farm biosecurityIlya B Slizovskiy, Tara N Gaire, Peter M Ferm, et al.
Gigascience|October 31, 2025
Quantitative detection of DNA methylation from nanopore sequencing data without raw signalsZhixing Feng, Chenxi Zhang, Shuo Jin, et al.
Gigascience|October 17, 2025
Cross-modal contrastive learning decodes developmental regulatory features through chromatin potential analysisYueyuxiao Yang, Chenxi Xie, Qiushun He, et al.
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