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NAR Genomics and Bioinformatics|February 12, 2021
Untangling biological factors influencing trajectory inference from single cell dataMohammed Charrout, Marcel J T Reinders, Ahmed MahfouzNAR Genomics and Bioinformatics|February 12, 2021
Benchmark study comparing liftover tools for genome conversion of epigenome sequencing dataPhuc-Loi Luu, Phuc-Thinh Ong, Thanh-Phuoc Dinh, et al.NAR Genomics and Bioinformatics|February 12, 2021
A random forest-based framework for genotyping and accuracy assessment of copy number variationsXuehan Zhuang, Rui Ye, Man-Ting So, et al.NAR Genomics and Bioinformatics|February 12, 2021
CONQUER: an interactive toolbox to understand functional consequences of GWAS hitsGerard A Bouland, Joline W J Beulens, Joey Nap, et al.NAR Genomics and Bioinformatics|February 12, 2021
Machine learning a model for RNA structure predictionNicola Calonaci, Alisha Jones, Francesca Cuturello, et al.NAR Genomics and Bioinformatics|February 12, 2021
Rapid discovery of novel prophages using biological feature engineering and machine learningKimmo Sirén, Andrew Millard, Bent Petersen, et al.NAR Genomics and Bioinformatics|February 12, 2021
Computational deconvolution to estimate cell type-specific gene expression from bulk dataMaria K Jaakkola, Laura L EloNAR Genomics and Bioinformatics|April 28, 2025
ARTdeConv: adaptive regularized tri-factor non-negative matrix factorization for cell type deconvolutionTianyi Liu, Chuwen Liu, Quefeng Li, et al.NAR Genomics and Bioinformatics|April 28, 2025
GINClus: RNA structural motif clustering using graph isomorphism networkNabila Shahnaz Khan, Md Mahfuzur Rahaman, Shaojie ZhangNAR Genomics and Bioinformatics|April 23, 2025
Exploring the latent space of transcriptomic data with topic modelingFilippo Valle, Michele Caselle, Matteo OsellaPageof 99