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NAR Genomics and Bioinformatics|August 30, 2024
DANTE and DANTE_LTR: lineage-centric annotation pipelines for long terminal repeat retrotransposons in plant genomesPetr Novák, Nina Hoštáková, Pavel Neumann, et al.
NAR Genomics and Bioinformatics|August 21, 2024
Distribution of specific prokaryotic immune systems correlates with host optimal growth temperatureLisa H Olijslager, Dolf Weijers, Daan C Swarts
NAR Genomics and Bioinformatics|August 21, 2024
Using recurrent neural networks to detect supernumerary chromosomes in fungal strains causing blast diseasesNikesh Gyawali, Yangfan Hao, Guifang Lin, et al.
NAR Genomics and Bioinformatics|August 22, 2024
FaSTPACE: a fast and scalable tool for peptide alignment and consensus extractionHazem M Kotb, Norman E Davey
NAR Genomics and Bioinformatics|November 5, 2024
Faster and more accurate assessment of differential transcript expression with Gibbs sampling and edgeR v4Pedro L Baldoni, Lizhong Chen, Gordon K Smyth
NAR Genomics and Bioinformatics|November 13, 2024
A general kernel machine regression framework using principal component analysis for jointly testing main and interaction effects: Applications to human microbiome studiesHyunwook Koh
NAR Genomics and Bioinformatics|August 12, 2024
Mitoclone2: an R package for elucidating clonal structure in single-cell RNA-sequencing data using mitochondrial variantsBenjamin Story, Lars Velten, Gregor Mönke, et al.
NAR Genomics and Bioinformatics|August 12, 2024
Latent Dirichlet allocation mixture models for nucleotide sequence analysisBixuan Wang, Stephen M Mount
NAR Genomics and Bioinformatics|August 12, 2024
High-quality chromosome scale genome assemblies of two important Sorghum inbred lines, Tx2783 and RTx436Bo Wang, Kapeel Chougule, Yinping Jiao, et al.
NAR Genomics and Bioinformatics|July 12, 2024
Optimizing hybrid ensemble feature selection strategies for transcriptomic biomarker discovery in complex diseasesElsa Claude, Mickaël Leclercq, Patricia Thébault, et al.
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