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NAR Genomics and Bioinformatics|February 12, 2021
dearseq: a variance component score test for RNA-seq differential analysis that effectively controls the false discovery rateMarine Gauthier, Denis Agniel, Rodolphe Thiébaut, et al.
NAR Genomics and Bioinformatics|February 12, 2021
TOUCAN: a framework for fungal biosynthetic gene cluster discoveryHayda Almeida, Sylvester Palys, Adrian Tsang, et al.
NAR Genomics and Bioinformatics|February 12, 2021
A new graph-based clustering method with application to single-cell RNA-seq data from human pancreatic isletsHao Wu, Disheng Mao, Yuping Zhang, et al.
NAR Genomics and Bioinformatics|February 12, 2021
BRAKER2: automatic eukaryotic genome annotation with GeneMark-EP+ and AUGUSTUS supported by a protein databaseTomáš Brůna, Katharina J Hoff, Alexandre Lomsadze, et al.
NAR Genomics and Bioinformatics|November 22, 2021
Transfer learning compensates limited data, batch effects and technological heterogeneity in single-cell sequencingYoungjun Park, Anne-Christin Hauschild, Dominik Heider
NAR Genomics and Bioinformatics|November 22, 2021
EpiDiverse Toolkit: a pipeline suite for the analysis of bisulfite sequencing data in ecological plant epigeneticsAdam Nunn, Sultan Nilay Can, Christian Otto, et al.
NAR Genomics and Bioinformatics|November 22, 2021
TSSr: an R package for comprehensive analyses of TSS sequencing dataZhaolian Lu, Keenan Berry, Zhenbin Hu, et al.
NAR Genomics and Bioinformatics|November 4, 2021
MutScape: an analytical toolkit for probing the mutational landscape in cancer genomicsCheng-Hua Lu, Chia-Hsin Wu, Mong-Hsun Tsai, et al.
NAR Genomics and Bioinformatics|March 3, 2021
Single-cell mapper (scMappR): using scRNA-seq to infer the cell-type specificities of differentially expressed genesDustin J Sokolowski, Mariela Faykoo-Martinez, Lauren Erdman, et al.
NAR Genomics and Bioinformatics|March 12, 2021
Probabilistic outlier identification for RNA sequencing generalized linear modelsStefano Mangiola, Evan A Thomas, Martin Modrák, et al.
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