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NAR Genomics and Bioinformatics|April 3, 2023
Transfer learning identifies sequence determinants of cell-type specific regulatory element accessibilityMarco Salvatore, Marc Horlacher, Annalisa Marsico, et al.NAR Genomics and Bioinformatics|April 3, 2023
Delineation of complex gene expression patterns in single cell RNA-seq data with ICARUS v2.0Andrew Jiang, Linya You, Russell G Snell, et al.NAR Genomics and Bioinformatics|April 16, 2021
BARTweb: a web server for transcriptional regulator association analysisWenjing Ma, Zhenjia Wang, Yifan Zhang, et al.NAR Genomics and Bioinformatics|October 10, 2022
SODA: a TypeScript/JavaScript library for visualizing biological sequence annotationJack W Roddy, George T Lesica, Travis J WheelerNAR Genomics and Bioinformatics|September 16, 2022
Inferring structural and dynamical properties of gene networks from data with deep learningFeng Chen, Chunhe LiNAR Genomics and Bioinformatics|September 16, 2022
Celda: a Bayesian model to perform co-clustering of genes into modules and cells into subpopulations using single-cell RNA-seq dataZhe Wang, Shiyi Yang, Yusuke Koga, et al.NAR Genomics and Bioinformatics|September 21, 2022
SPROUT: spectral sparsification helps restore the spatial structure at single-cell resolutionJingwan Wang, Shiying Li, Lingxi Chen, et al.NAR Genomics and Bioinformatics|September 21, 2022
Computational identification of signals predictive for nuclear RNA exosome degradation pathway targetingMengjun Wu, Manfred Schmid, Torben Heick Jensen, et al.NAR Genomics and Bioinformatics|December 25, 2023
Restrander: rapid orientation and artefact removal for long-read cDNA dataJakob Schuster, Matthew E Ritchie, Quentin GouilNAR Genomics and Bioinformatics|March 19, 2024
Evolutionary and functional insights into the Ski2-like helicase family in Archaea: a comparison of Thermococcales ASH-Ski2 and Hel308 activitiesManon Batista, Petra Langendijk-Genevaux, Marta Kwapisz, et al.Pageof 102