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Nature Methods|January 2, 2025
Efficiently accelerated bioimage analysis with NanoPyx, a Liquid Engine-powered Python frameworkBruno M Saraiva, Inês Cunha, António D Brito, et al.Nature Methods|April 10, 2025
Perturb-tracing enables high-content screening of multi-scale 3D genome regulatorsYubao Cheng, Mengwei Hu, Bing Yang, et al.Nature Methods|November 28, 2024
Evaluation of large language models for discovery of gene set functionMengzhou Hu, Sahar Alkhairy, Ingoo Lee, et al.Nature Methods|November 28, 2024
A proteome-wide quantitative platform for nanoscale spatially resolved extraction of membrane proteins into native nanodiscsCaroline Brown, Snehasish Ghosh, Rachel McAllister, et al.Nature Methods|November 21, 2024
Accurate RNA 3D structure prediction using a language model-based deep learning approachTao Shen, Zhihang Hu, Siqi Sun, et al.Nature Methods|November 20, 2024
Repurposing large-format microarrays for scalable spatial transcriptomicsDenis Cipurko, Tatsuki Ueda, Linghan Mei, et al.Nature Methods|November 12, 2024
Long-term optical imaging of the spinal cord in awake behaving miceBiafra Ahanonu, Andrew Crowther, Artur Kania, et al.Nature Methods|November 14, 2024
Deep learning-based models for preimplantation mouse and human embryos based on single-cell RNA sequencingMartin Proks, Nazmus Salehin, Joshua M BrickmanNature Methods|November 14, 2024
A comprehensive human embryo reference tool using single-cell RNA-sequencing dataCheng Zhao, Alvaro Plaza Reyes, John Paul Schell, et al.Nature Methods|October 9, 2024
De novo protein design with a denoising diffusion network independent of pretrained structure prediction modelsYufeng Liu, Sheng Wang, Jixin Dong, et al.Pageof 342