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Nature Methods|January 11, 2018
Multicolor quantitative confocal imaging cytometryDaniel L Coutu, Konstantinos D Kokkaliaris, Leo Kunz, et al.Nature Methods|November 17, 2020
Avant-garde: an automated data-driven DIA data curation toolAlvaro Sebastian Vaca Jacome, Ryan Peckner, Nicholas Shulman, et al.Nature Methods|June 22, 2026
3D pathology-guided microdissectionHuai-Ching Hsieh, Gan Gao, Qinghua Han, et al.Nature Methods|June 5, 2026
Brightness demixing for simultaneous multi-target imaging in 3D single-molecule localization microscopyLaurent Le, Surabhi K Sreenivas, Emmanuel Fort, et al.Nature Methods|May 27, 2026
TADShop: systematic benchmarking and identification of topologically associating domainsPumin Li, Andras Hatos, Miljan Petrovic, et al.Nature Methods|May 19, 2026
StringTie3 improves total RNA-seq assembly by resolving nascent and mature transcriptsIda Shinder, Geo Pertea, Richard Hu, et al.Nature Methods|May 25, 2026
AreTomoLive: automated reconstruction of comprehensively corrected and denoised cryo-electron tomograms in real time and at high throughputAriana Peck, Yue Yu, Mohammadreza Paraan, et al.Nature Methods|May 25, 2026
An encyclopedic regulatory and functional atlas of RNA interactomesKeren Zhou, Junhong Huang, Shurong Liu, et al.Nature Methods|May 14, 2026
Recommendations and considerations for hydroxyl radical protein footprinting-mass spectrometryAaron T Wecksler, Lingfei Wang, Lisa J Bernstein, et al.Nature Methods|May 14, 2026
Unraveling lncRNA diversity at a single cell resolution and in a spatial context across different cancer typesP Prakrithi, Tuan Vo, Zherui Xiong, et al.Pageof 342