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Nature Methods|August 7, 2025
PANCS-Binders: a rapid, high-throughput binder discovery platformMatthew J Styles, Joshua A Pixley, Tongyao Wei, et al.Nature Methods|October 23, 2025
PHLOWER leverages single-cell multimodal data to infer complex, multi-branching cell differentiation trajectoriesMingbo Cheng, Jitske Jansen, Katharina C Reimer, et al.Nature Methods|October 22, 2025
scooby: modeling multimodal genomic profiles from DNA sequence at single-cell resolutionJohannes C Hingerl, Laura D Martens, Alexander Karollus, et al.Nature Methods|July 15, 2025
Genetically encoded biosensor for monitoring spatiotemporal dynamics of CCR2 ligands in culture and in vivoXian Xiao, Chenyu Wang, Xun Guo, et al.Nature Methods|September 11, 2025
Coupling CRISPR scanning with targeted chromatin accessibility profiling using a double-stranded DNA deaminaseHeejin Roh, Simon P Shen, Yan Hu, et al.Nature Methods|September 11, 2025
Biophysics-based protein language models for protein engineeringSam Gelman, Bryce Johnson, Chase R Freschlin, et al.Nature Methods|September 22, 2025
RNA-stabilized coat proteins for sensitive and simultaneous imaging of distinct single mRNAs in live cellsChristopher J Kuffner, Alexander M Marzilli, John T NgoNature Methods|June 6, 2025
Benchmarking methods for mapping functional connectivity in the brainZhen-Qi Liu, Andrea I Luppi, Justine Y Hansen, et al.Nature Methods|June 5, 2025
Krakencoder: a unified brain connectome translation and fusion toolKeith W Jamison, Zijin Gu, Qinxin Wang, et al.Nature Methods|May 28, 2025
SAVANA: reliable analysis of somatic structural variants and copy number aberrations using long-read sequencingHillary Elrick, Carolin M Sauer, Jose Espejo Valle-Inclan, et al.Pageof 344