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Nature Methods|December 30, 2025
TransBrain: a computational framework for translating brain-wide phenotypes between humans and miceShangzheng Huang, Tongyu Zhang, Changsheng Dong, et al.Nature Methods|November 29, 2025
Assessment of computational methods in predicting TCR-epitope binding recognitionYanping Lu, Yuyan Wang, Meng Xu, et al.Nature Methods|November 27, 2025
Nondestructive X-ray tomography of brain tissue ultrastructureCarles Bosch, Tomas Aidukas, Mirko Holler, et al.Nature Methods|May 9, 2024
Scalable and unbiased sequence-informed embedding of single-cell ATAC-seq data with CellSpaceZakieh Tayyebi, Allison R Pine, Christina S LeslieNature Methods|May 10, 2024
Scalable telomere-to-telomere assembly for diploid and polyploid genomes with double graphHaoyu Cheng, Mobin Asri, Julian Lucas, et al.Nature Methods|April 23, 2024
Can AlphaFold's breakthrough in protein structure help decode the fundamental principles of adaptive cellular immunity?Benjamin McMaster, Christopher Thorpe, Graham Ogg, et al.Nature Methods|January 9, 2024
Neurodesk: an accessible, flexible and portable data analysis environment for reproducible neuroimagingAngela I Renton, Thuy T Dao, Tom Johnstone, et al.Nature Methods|December 27, 2023
Thermal-plex: fluidic-free, rapid sequential multiplexed imaging with DNA-encoded thermal channelsFan Hong, Jocelyn Y Kishi, Ryan N Delgado, et al.Nature Methods|December 22, 2023
The Cousa objective: a long-working distance air objective for multiphoton imaging in vivoChe-Hang Yu, Yiyi Yu, Liam M Adsit, et al.Nature Methods|January 18, 2024
Square beams for optimal tiling in transmission electron microscopyEugene Y D Chua, Lambertus M Alink, Mykhailo Kopylov, et al.Pageof 344