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Nature Methods|September 15, 2025
Integrating diverse experimental information to assist protein complex structure prediction by GRASPYuhao Xie, Chengwei Zhang, Shimian Li, et al.Nature Methods|September 15, 2025
De novo discovery of conserved gene clusters in microbial genomes with SpacedustRuoshi Zhang, Milot Mirdita, Johannes SödingNature Methods|August 10, 2025
Co-profiling of in situ RNA-protein interactions and transcriptome in single cells and tissuesQi-Xuan Cheng, Gang Xie, Xiangyu Zhang, et al.Nature Methods|August 4, 2025
The Platinum Pedigree: a long-read benchmark for genetic variantsZev Kronenberg, Cillian Nolan, David Porubsky, et al.Nature Methods|September 10, 2025
CLEM-Reg: an automated point cloud-based registration algorithm for volume correlative light and electron microscopyDaniel Krentzel, Matouš Elphick, Marie-Charlotte Domart, et al.Nature Methods|August 3, 2021
StrucGP: de novo structural sequencing of site-specific N-glycan on glycoproteins using a modularization strategyJiechen Shen, Li Jia, Liuyi Dang, et al.Nature Methods|August 3, 2021
Transgenic mice for in vivo epigenome editing with CRISPR-based systemsMatthew P Gemberling, Keith Siklenka, Erica Rodriguez, et al.Nature Methods|July 10, 2025
Benchmarking single-cell multi-modal data integrationsShaliu Fu, Shuguang Wang, Duanmiao Si, et al.Nature Methods|July 14, 2025
Fast, cost-effective and flexible DNA sequencing by roll-to-roll fluidicsYanzhe Qin, Stephan A Koehler, Yunyan Ling, et al.Nature Methods|December 18, 2025
SpaceBar enables single-cell-resolution clone tracing with imaging-based spatial transcriptomicsGrant Kinsler, Caitlin Fagan, Haiyin Li, et al.Pageof 339