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Plos Computational Biology|February 29, 2024
TimeTeller: A tool to probe the circadian clock as a multigene dynamical systemDenise Vlachou, Maria Veretennikova, Laura Usselmann, et al.Plos Computational Biology|February 29, 2024
Developmental hourglass: Verification by numerical evolution and elucidation by dynamical-systems theoryTakahiro Kohsokabe, Shigeru Kuratanai, Kunihiko KanekoPlos Computational Biology|February 29, 2024
HormoneBayes: A novel Bayesian framework for the analysis of pulsatile hormone dynamicsMargaritis Voliotis, Ali Abbara, Julia K Prague, et al.Plos Computational Biology|March 1, 2024
Computational models of compound nerve action potentials: Efficient filter-based methods to quantify effects of tissue conductivities, conduction distance, and nerve fiber parametersEdgar Peña, Nicole A Pelot, Warren M GrillPlos Computational Biology|February 8, 2024
Dynamic predictive coding: A model of hierarchical sequence learning and prediction in the neocortexLinxing Preston Jiang, Rajesh P N RaoPlos Computational Biology|February 8, 2024
Robust expansion of phylogeny for fast-growing genome sequence dataYongtao Ye, Marcus H Shum, Joseph L Tsui, et al.Plos Computational Biology|February 28, 2024
Quantifying the clusterness and trajectoriness of single-cell RNA-seq dataHong Seo Lim, Peng QiuPlos Computational Biology|February 28, 2024
STGIC: A graph and image convolution-based method for spatial transcriptomic clusteringChen Zhang, Junhui Gao, Hong-Yu Chen, et al.Plos Computational Biology|February 29, 2024
Identifying metabolic adaptations characteristic of cardiotoxicity using paired transcriptomics and metabolomics data integrated with a computational model of heart metabolismBonnie V Dougherty, Connor J Moore, Kristopher D Rawls, et al.Plos Computational Biology|February 12, 2024
Accounting for isoform expression increases power to identify genetic regulation of gene expressionNathan LaPierre, Harold PimentelPageof 1,199