Yongxin Ji

16PUBLICATIONS
14CO-AUTHORS
Host-parasite interactionsBioinformatic methods developmentBiological adaptationDeep learningPlant and fungus systematics and taxonomy
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Publications (16)

|Jul 07, 2026
PhageMind: generalized strain-level phage host range prediction via meta-learning.

|Apr 23, 2026
PhaBOX2: an enhanced web server for discovering and analyzing viral contigs in metagenomic data.

|Mar 26, 2026
Fast and accurate identification of emerging viral reassortment from genome sequences.

Dehan Cai, Jiayu Shang, Cheng Peng

|Nov 24, 2025
From genomic signals to prediction tools: a critical feature analysis and rigorous benchmark for phage-host prediction.

Jiayu Shang, Cheng Peng, Jiaojiao Guan

|Jul 15, 2025
GiantHunter: accurate detection of giant virus in metagenomic data using reinforcement-learning and Monte Carlo tree search.

Fuchuan Qu, Cheng Peng, Jiaojiao Guan

|Jan 22, 2025
GOPhage: protein function annotation for bacteriophages by integrating the genomic context.

Jiaojiao Guan, Yongxin Ji, Cheng Peng

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Frequent Collaborators

15 joint publications

Yanni Sun

6 joint publications

Xubo Tang

6 joint publications

Jiaojiao Guan

6 joint publications

Cheng Peng