Florian Plaza Oñate

9PUBLICATIONS
39CO-AUTHORS
Computational ecology and phylogeneticsMicrobial geneticsNutrigenomics and personalised nutritionGenomics and transcriptomicsPhylogeny and comparative analysis
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Publications (9)

|Oct 01, 2026
NeighborFinder: an R package inferring local microbial network around a species of interest.

|May 08, 2026
CroCoDeEL: accurate control-free detection of cross-sample contamination in metagenomic data.

|Nov 06, 2025
Assessment of protocols for characterization of the human skin microbiome using shotgun metagenomics and comparative analysis with 16S metabarcoding.

Florian Plaza Oñate, Benoît Quinquis, Florence Thirion

|Sep 08, 2024
Transient colonizing microbes promote gut dysbiosis and functional impairment.

Sunjae Lee, Victoria Meslier, Gholamreza Bidkhori

|Aug 12, 2023
Adlercreutzia equolifaciens Is an Anti-Inflammatory Commensal Bacterium with Decreased Abundance in Gut Microbiota of Patients with Metabolic Liver Disease.

Florian Plaza Oñate, Célia Chamignon, Sebastian D Burz

|Nov 11, 2022
Benchmarking second and third-generation sequencing platforms for microbial metagenomics.

Victoria Meslier, Benoit Quinquis, Kévin Da Silva

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Frequent Collaborators

4 joint publications

Emmanuelle Le Chatelier

3 joint publications

Mathieu Almeida

2 joint publications

Benoit Quinquis

2 joint publications

Victoria Meslier