Jiřı Šponer

69PUBLICATIONS
94CO-AUTHORS
Bioinformatic methods developmentSequence analysisBacteriologyOptimisationElectronic and magnetic properties of condensed matter; superconductivity
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Publications (69)

|Aug 19, 2026
From gHBfix to NBfix: Reweighting-Driven Refinement of Hydrogen-Bond Interactions in RNA Force Fields.

|May 14, 2026
Toward Accurate RNA Folding Thermodynamics: Evaluation of Enhanced Sampling Methods for Force Field Benchmarking.

|Apr 22, 2026
Newton's cradle-like allosteric mechanism explains regulatory RsmE RNA binding.

|Feb 10, 2026
Destabilization of Structured RNAs by OPC and TIP4PD Water Models.

Miroslav Krepl, Vojtěch Mlýnský, Agnesa Rusnáková

|Dec 19, 2025
Interaction of Carbon Dots with Nucleic Acids Is Driven by Their Surface Charge.

Andrea Nedělníková, Petr Stadlbauer, Pavel Banáš

|Dec 08, 2025
The Kink-Turn 7 Motif: An Additional Test for RNA Force Field Performance.

Toon Lemmens, Vojtěch Mlýnský, Jiří Šponer

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Frequent Collaborators

23 joint publications

Miroslav Krepl

22 joint publications

Michal Otyepka

22 joint publications

Pavel Banáš

21 joint publications

Vojtěch Mlýnský