Donovan H Parks

24PUBLICATIONS
84CO-AUTHORS
GenomicsFish physiology and geneticsMedical virologyMicrobial geneticsComputational ecology and phylogenetics
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Publications (24)

|Oct 22, 2025
GTDB release 10: a complete and systematic taxonomy for 715 230 bacterial and 17 245 archaeal genomes.

Donovan H Parks, Pierre-Alain Chaumeil, Aaron J Mussig

|Jul 07, 2025
GenomeFISH: genome-based fluorescence in situ hybridization for strain-level visualization of microbial communities.

J Pamela Engelberts, Jun Ye, Donovan H Parks

|Mar 22, 2024
Author Correction: CheckM2: a rapid, scalable and accurate tool for assessing microbial genome quality using machine learning.

Alex Chklovski, Donovan H Parks, Ben J Woodcroft

|Oct 18, 2023
Author Correction: Greengenes2 unifies microbial data in a single reference tree.

Daniel McDonald, Yueyu Jiang, Metin Balaban

|Jul 27, 2023
Greengenes2 unifies microbial data in a single reference tree.

Daniel McDonald, Yueyu Jiang, Metin Balaban

|Jul 27, 2023
CheckM2: a rapid, scalable and accurate tool for assessing microbial genome quality using machine learning.

Alex Chklovski, Donovan H Parks, Ben J Woodcroft

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Frequent Collaborators

15 joint publications

Philip Hugenholtz

8 joint publications

Christian Rinke

7 joint publications

Aaron J Mussig

7 joint publications

Gene W Tyson