Donovan H Parks
24PUBLICATIONS
84CO-AUTHORS
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Publications (24)
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|Oct 22, 2025
GTDB release 10: a complete and systematic taxonomy for 715 230 bacterial and 17 245 archaeal genomes.Donovan H Parks, Pierre-Alain Chaumeil, Aaron J Mussig
|Jul 07, 2025
GenomeFISH: genome-based fluorescence in situ hybridization for strain-level visualization of microbial communities.J Pamela Engelberts, Jun Ye, Donovan H Parks
|Jul 27, 2023
Greengenes2 unifies microbial data in a single reference tree.Daniel McDonald, Yueyu Jiang, Metin Balaban
|Jul 27, 2023
CheckM2: a rapid, scalable and accurate tool for assessing microbial genome quality using machine learning.Alex Chklovski, Donovan H Parks, Ben J Woodcroft
|Jul 22, 2023
Proposal of names for 329 higher rank taxa defined in the Genome Taxonomy Database under two prokaryotic codes.Maria Chuvochina, Aaron J Mussig, Pierre-Alain Chaumeil
|Oct 11, 2022
GTDB-Tk v2: memory friendly classification with the genome taxonomy database.Pierre-Alain Chaumeil, Aaron J Mussig, Philip Hugenholtz
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Frequent Collaborators
15 joint publications
Philip Hugenholtz
8 joint publications
Christian Rinke
7 joint publications
Aaron J Mussig
7 joint publications
Gene W Tyson
4 joint publications
Ben J Woodcroft
3 joint publications
Marike Palmer
3 joint publications
Anna-Louise Reysenbach
3 joint publications
Alison E Murray
3 joint publications
Rob Knight
3 joint publications
Brian P Hedlund
