Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Mario Stanke

12PUBLICATIONS
32CO-AUTHORS
Phylogeny and comparative analysisOther history, heritage and archaeology not elsewhere classifiedDeep learningSequence analysisGenomics and transcriptomics
Featured researcher

Get your video featured.

JoVEPublish with JoVE
Featured researcher

Get your video featured.

JoVEPublish with JoVE
Journal

Publications (12)

Sort by Publication Date:
|May 07, 2026
Accurate <i>ab initio</i> gene prediction in eukaryotes with Tiberius in multiple clades.

|May 13, 2025
Genomic map of the functionally extinct northern white rhinoceros (<i>Ceratotherium simum cottoni</i>).

Gaojianyong Wang, Marisa L Korody, Björn Brändl

|Nov 19, 2024
Tiberius: end-to-end deep learning with an HMM for gene prediction.

Lars Gabriel, Felix Becker, Katharina J Hoff

|Sep 04, 2024
learnMSA2: deep protein multiple alignments with large language and hidden Markov models.

Felix Becker, Mario Stanke

|Jun 12, 2024
BRAKER3: Fully automated genome annotation using RNA-seq and protein evidence with GeneMark-ETP, AUGUSTUS, and TSEBRA.

Lars Gabriel, Tomáš Brůna, Katharina J Hoff

|Jul 03, 2023
BRAKER3: Fully automated genome annotation using RNA-seq and protein evidence with GeneMark-ETP, AUGUSTUS and TSEBRA.

Lars Gabriel, Tomáš Brůna, Katharina J Hoff

Pageof 2

Frequent Collaborators

4 joint publications

Mario Stanke

2 joint publications

Alexandre Lomsadze

2 joint publications

Lars Gabriel

1 joint publications

Anne K Schütz

1 joint publications

E Tobias Krause

1 joint publications

Mareike Fischer

1 joint publications

Thomas Müller

1 joint publications

Conrad M Freuling

1 joint publications

Franz J Conraths

1 joint publications

Timo Homeier-Bachmann

Frequent Collaborators

4 joint publications

Mario Stanke

2 joint publications

Alexandre Lomsadze

2 joint publications

Lars Gabriel

1 joint publications

Anne K Schütz