Mario Stanke

12PUBLICATIONS
32CO-AUTHORS
Phylogeny and comparative analysisOther history, heritage and archaeology not elsewhere classifiedDeep learningSequence analysisGenomics and transcriptomics
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Publications (12)

|May 07, 2026
Accurate ab initio gene prediction in eukaryotes with Tiberius in multiple clades.

|May 13, 2025
Genomic map of the functionally extinct northern white rhinoceros (Ceratotherium simum cottoni).

Gaojianyong Wang, Marisa L Korody, Björn Brändl

|Nov 19, 2024
Tiberius: end-to-end deep learning with an HMM for gene prediction.

Lars Gabriel, Felix Becker, Katharina J Hoff

|Sep 04, 2024
learnMSA2: deep protein multiple alignments with large language and hidden Markov models.

Felix Becker, Mario Stanke

|Jun 12, 2024
BRAKER3: Fully automated genome annotation using RNA-seq and protein evidence with GeneMark-ETP, AUGUSTUS, and TSEBRA.

Lars Gabriel, Tomáš Brůna, Katharina J Hoff

|Jul 03, 2023
BRAKER3: Fully automated genome annotation using RNA-seq and protein evidence with GeneMark-ETP, AUGUSTUS and TSEBRA.

Lars Gabriel, Tomáš Brůna, Katharina J Hoff

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Frequent Collaborators

4 joint publications

Mario Stanke

2 joint publications

Alexandre Lomsadze

2 joint publications

Lars Gabriel

1 joint publications

Anne K Schütz