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Julio Collado-Vides

7PUBLICATIONS

21CO-AUTHORS

Epigenetics (incl. genome methylation and epigenomics)Industrial molecular engineering of nucleic acids and proteinsGene expression (incl. microarray and other genome-wide approaches)Genome structure and regulationComputational methods in fluid flow, heat and mass transfer (incl. computational fluid dynamics)

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Publications (7)

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|May 07, 2025

Predictive biophysical neural network modeling of a compendium of in vivo transcription factor DNA binding profiles for Escherichia coli.

Patrick Lally, Laura Gómez-Romero, Víctor H Tierrafría

|Sep 30, 2024

A Cryptic Prophage Transcription Factor Drives Phenotypic Changes via Host Gene Regulation.

P Lally, V H Tierrafría, L Gómez-Romero

|Jun 03, 2024

Predictive Biophysical Neural Network Modeling of a Compendium of <i>in vivo</i> Transcription Factor DNA Binding Profiles for <i>Escherichia coli</i>.

Patrick Lally, Laura Gómez-Romero, Víctor H Tierrafría

|Nov 16, 2023

RegulonDB v12.0: a comprehensive resource of transcriptional regulation in E. coli K-12.

Heladia Salgado, Socorro Gama-Castro, Paloma Lara

|May 10, 2023

A Gold Standard for Transcription Factor Regulatory Interactions in <i>Escherichia coli</i> K-12: Architecture of Evidence Types.

Paloma Lara, Socorro Gama-Castro, Heladia Salgado

|Feb 06, 2023

Regulatory promoter architectures in the hands of thermodynamic modelling.

Julio Collado-Vides

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Frequent Collaborators

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Joseph T Wade

4 joint publications

James E Galagan

3 joint publications

Patrick Lally

3 joint publications

Víctor H Tierrafría

3 joint publications

Claire Rioualen

2 joint publications

Laura Gómez-Romero

2 joint publications

Heladia Salgado

1 joint publications

A Stringer

1 joint publications

Mohan Babu

1 joint publications

Stephen J W Busby

Frequent Collaborators

4 joint publications

Joseph T Wade

4 joint publications

James E Galagan

3 joint publications

Patrick Lally

3 joint publications

Víctor H Tierrafría

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