Jake Y Chen

16PUBLICATIONS
152CO-AUTHORS
Deep learningEpigenetics (incl. genome methylation and epigenomics)Genomics and transcriptomicsInformation extraction and fusionQuery processing and optimisation
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Publications (16)

|Jul 10, 2026
MondrianMap: Navigating Gene Set Hierarchies with Multi-Resolution Enrichment Maps.

|Jul 01, 2026
A genome-scale CRISPRi perturbation atlas of human induced pluripotent stem cells.

|May 25, 2026
GOLDEN fusion: a graph-oriented learning with domain-embedding network fusion for generating super gene sets in functional genomics.

|Apr 17, 2026
The Common Fund Data Ecosystem (CFDE).

|Jan 14, 2026
Research Code Sharing in Support of Gold Standard Science.

David C Klonoff, Juan Espinoza, Julia K Mader

|Jan 08, 2026
TabGraphSyn: Graph-Guided Latent Diffusion for High-Fidelity and Privacy-Conscious Clinical Data Generation.

Zongqian Wu, Huiping Chen, Jake Y Chen

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Frequent Collaborators

2 joint publications

Monica C Munoz-Torres

2 joint publications

Md Delower Hossain

2 joint publications

Jan N Hansen

2 joint publications

Zongliang Yue