Jiaqi Li

7PUBLICATIONS
12CO-AUTHORS
Gene expression (incl. microarray and other genome-wide approaches)Genome structure and regulationNeural networksEpigenetics (incl. genome methylation and epigenomics)Deep learning
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Publications (7)

|Feb 09, 2026
A generic reference defined by consensus peaks for single-cell ATAC-seq data analysis.

Qiuchen Meng, Xinze Wu, Wenchang Chen

|Feb 08, 2025
Modeling and designing enhancers by introducing and harnessing transcription factor binding units.

Jiaqi Li, Pengcheng Zhang, Xi Xi

|Feb 03, 2025
A mechanism-informed deep neural network enables prioritization of regulators that drive cell state transitions.

Xi Xi, Jiaqi Li, Jinmeng Jia

|Jun 28, 2024
Unveil cis-acting combinatorial mRNA motifs by interpreting deep neural network.

Xiaocheng Zeng, Zheng Wei, Qixiu Du

|Jul 08, 2022
Evaluating methylation of human ribosomal DNA at each CpG site reveals its utility for cancer detection using cell-free DNA.

Xianglin Zhang, Xiaodong Jia, Bixi Zhong

|Jul 10, 2021
DISMIR: Deep learning-based noninvasive cancer detection by integrating DNA sequence and methylation information of individual cell-free DNA reads.

Jiaqi Li, Lei Wei, Xianglin Zhang

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Frequent Collaborators

7 joint publications

Xiaowo Wang

4 joint publications

Lei Wei

3 joint publications

Xi Xi

2 joint publications

Zheng Wei