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Johannes Soeding

21PUBLICATIONS

49CO-AUTHORS

Microbial geneticsProgramming languagesSequence analysisMicrobial taxonomyNeurology and neuromuscular diseases

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Publications (21)

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|Sep 15, 2025

De novo discovery of conserved gene clusters in microbial genomes with Spacedust.

Ruoshi Zhang, Milot Mirdita, Johannes Söding

|Nov 07, 2023

DescribePROT in 2023: more, higher-quality and experimental annotations and improved data download options.

Sushmita Basu, Bi Zhao, Bálint Biró

|Jun 12, 2023

Cooperativity boosts affinity and specificity of proteins with multiple RNA-binding domains.

Simon H Stitzinger, Salma Sohrabi-Jahromi, Johannes Söding

|May 08, 2023

Fast and accurate protein structure search with Foldseek.

Michel van Kempen, Stephanie S Kim, Charlotte Tumescheit

|Feb 23, 2023

RNA sequencing indicates widespread conservation of circadian clocks in marine zooplankton.

Venket Raghavan, Gregor Eichele, Otto Larink

|Apr 15, 2022

Cln5 represents a new type of cysteine-based <i>S</i>-depalmitoylase linked to neurodegeneration.

Anna V Luebben, Daniel Bender, Stefan Becker

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Frequent Collaborators

5 joint publications

Milot Mirdita

5 joint publications

Martin Steinegger

3 joint publications

Eli Levy Karin

2 joint publications

Ruoshi Zhang

2 joint publications

Dong Xu

1 joint publications

F Breitwieser

1 joint publications

Andrei N Lupas

1 joint publications

Soma Ghosh

1 joint publications

Nicolas Gompel

1 joint publications

Utkarsh Shah

Frequent Collaborators

5 joint publications

Milot Mirdita

5 joint publications

Martin Steinegger

3 joint publications

Eli Levy Karin

2 joint publications

Ruoshi Zhang

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