Yuji Sugita

69PUBLICATIONS
154CO-AUTHORS
Computational chemistryBioinformatic methods developmentInstruments and techniquesTheory and design of materialsStructural biology (incl. macromolecular modelling)
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Publications (69)

|Sep 17, 2025
CGBack: Diffusion Model for Backmapping Large-Scale and Complex Coarse-Grained Molecular Systems.

Diego Ugarte La Torre, Yuji Sugita

|Sep 04, 2025
An Empirical Biasing Force Constant to Minimize Overfitting in Cryo-EM Flexible Fitting Refinement.

Daisuke Matsuoka, Yuji Sugita, Takaharu Mori

|Aug 12, 2025
The distortion-push mechanism for the γ subunit rotation in F1-ATPase.

Masahiro Motohashi, Mao Oide, Chigusa Kobayashi

|May 05, 2025
ColBuilder: flexible structure generation of crosslinked collagen fibrils.

Debora Monego, Matthias Brosz, Johanna Buck

|Apr 02, 2025
The need to implement FAIR principles in biomolecular simulations.

Rommie E Amaro, Johan Åqvist, Ivet Bahar

|Apr 02, 2025
High-performance QM/MM Enhanced Sampling Molecular Dynamics Simulations with GENESIS SPDYN and QSimulate-QM.

Kiyoshi Yagi, Klaas Gunst, Toru Shiozaki

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