Cedric Chauve

9PUBLICATIONS
36CO-AUTHORS
Computational statisticsArchitectural designPhylogeny and comparative analysisAutomated software engineeringSequence analysis
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Publications (9)

|May 19, 2026
On using clustering statistics for assessing plasmid binning tools accuracy.

|Mar 12, 2026
Undesignable motifs in structural RNAs and combinatorial consequences.

Hua-Ting Yao, Cedric Chauve, Mireille Regnier

|Feb 20, 2025
A vector representation for phylogenetic trees.

Cedric Chauve, Caroline Colijn, Louxin Zhang

|Jan 26, 2024
TKSM: highly modular, user-customizable, and scalable transcriptomic sequencing long-read simulator.

Fatih Karaoğlanoğlu, Baraa Orabi, Ryan Flannigan

|Jun 30, 2023
PlasBin-flow: a flow-based MILP algorithm for plasmid contigs binning.

Aniket Mane, Mahsa Faizrahnemoon, Tomáš Vinař

|Dec 08, 2022
Freddie: annotation-independent detection and discovery of transcriptomic alternative splicing isoforms using long-read sequencing.

Baraa Orabi, Ning Xie, Brian McConeghy

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Frequent Collaborators

2 joint publications

Faraz Hach

2 joint publications

Baraa Orabi

2 joint publications

Yann Ponty

1 joint publications

Aniket Mane