Pu-Feng Du

7PUBLICATIONS
0CO-AUTHORS
Gene expression (incl. microarray and other genome-wide approaches)Recordkeeping informaticsGenome structure and regulationBiological network analysis
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Publications (7)

|Jun 14, 2026
GraphChIAr: genome-wide super-resolution reconstruction of protein-mediated remote chromatin interactions by augmenting hi-C interaction maps with multiple ChIP-seq profiles.

|Nov 14, 2025
scDIFF: automatic cell type annotation using scATAC-seq data by incorporating bulk-level genomic and epigenomic information in a deep diffusive transformer.

Hao-Yu Wang, Hao Dong, Pu-Feng Du

|Apr 06, 2025
scMUG: deep clustering analysis of single-cell RNA-seq data on multiple gene functional modules.

De-Min Liang, Pu-Feng Du

|Jan 03, 2024
SilenceREIN: seeking silencers on anchors of chromatin loops by deep graph neural networks.

Jian-Hua Pan, Pu-Feng Du

|Mar 31, 2023
dbMisLoc: A Manually Curated Database of Conditional Protein Mis-localization Events.

Ren-Hua Wang, Tao Luo, Yu-Peng Guo

|Mar 15, 2023
iEssLnc: quantitative estimation of lncRNA gene essentialities with meta-path-guided random walks on the lncRNA-protein interaction network.

Ying-Ying Zhang, De-Min Liang, Pu-Feng Du

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