Ferhat Ay

48PUBLICATIONS
158CO-AUTHORS
Genome structure and regulationEpigenetics (incl. genome methylation and epigenomics)AutoimmunityGene expression (incl. microarray and other genome-wide approaches)Bioinformatic methods development
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Publications (48)

|May 27, 2026
CTCF directly binds G-quadruplex structures to regulate genome topology and gene expression.

|Mar 23, 2026
EpiExpr: Predicting gene expression using epigenetic data and chromatin interactions.

Sourya Bhattacharyya, Ferhat Ay

|Nov 07, 2025
TH17 cells converted into exTH17 cells sustain rheumatoid-like IL-17-independent inflammatory arthritis.

Martina Zoccheddu, Kensuke Suga, Amara Seng

|Jul 27, 2025
Single-cell transcriptomics of ventral forebrain progenitors identifies Evf2 enhancer lncRNA-enhancer gene guidance through direct RNA binding and RNP recruitment domains.

Edward Li, Abhijit Chakraborty, Sara J Kohtz

|Jul 17, 2025
Master transcription-factor binding sites constitute the core of early replication control elements.

Jesse L Turner, Laura Hinojosa-Gonzalez, Takayo Sasaki

|Jul 15, 2025
Soffritto: a deep learning model for predicting high-resolution replication timing.

Dante Bolzan, Ferhat Ay

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Frequent Collaborators

8 joint publications

Pandurangan Vijayanand

7 joint publications

Sourya Bhattacharyya

6 joint publications

Grégory Seumois

5 joint publications

Christian H Ottensmeier