Thomas Dan Otto

40PUBLICATIONS
151CO-AUTHORS
Host-parasite interactionsGenome structure and regulationInnate immunitySequence analysisGenomics and transcriptomics
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Publications (40)

|Jun 15, 2026
Plasmodium falciparum leucine-rich repeat 5 disruption alters the transcription progression during asexual and sexual stage development.

|May 25, 2026
Trypanosoma cruzi cell atlas as a single-cell resource for understanding parasite population heterogeneity and differentiation.

|Apr 16, 2026
upsML: A high-accuracy machine learning classifier for predicting Plasmodium falciparum var gene upstream groups.

|Aug 23, 2025
Spatial transcriptomics elucidates localized immune responses in atherosclerotic coronary artery.

Joana Campos, Jack L McMurray, Michelangelo Certo

|Mar 11, 2025
TrAGEDy-trajectory alignment of gene expression dynamics.

Ross F Laidlaw, Emma M Briggs, Keith R Matthews

|Feb 23, 2025
paraCell: a novel software tool for the interactive analysis and visualization of standard and dual host-parasite single-cell RNA-seq data.

Edward Agboraw, William Haese-Hill, Franziska Hentzschel

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Frequent Collaborators

6 joint publications

Matthew Berriman

4 joint publications

David J Conway

4 joint publications

Matthias Marti

4 joint publications

Julian C Rayner