Vikram Shivakumar

10PUBLICATIONS
82CO-AUTHORS
Gene expression (incl. microarray and other genome-wide approaches)Information retrieval and web searchQuery processing and optimisationGraph, social and multimedia dataInformation extraction and fusion
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Publications (10)

|Aug 01, 2026
HPRC2: A human pangenome reference with near-complete coverage of common genetic variation.

|Jul 17, 2026
Navigating the pangenome coordinate system with Shredtools.

|Dec 15, 2025
Prefix-free parsing for merging big BWTs.

Diego Díaz-Domínguez, Travis Gagie, Veronica Guerrini

|Nov 07, 2025
Partitioned multi-MUM finding for scalable pangenomics with MumemtoM.

Vikram S Shivakumar, Ben Langmead

|Jun 06, 2025
Partitioned Multi-MUM finding for scalable pangenomics.

Vikram S Shivakumar, Ben Langmead

|Jan 20, 2025
Fast and flexible minimizer digestion with digest.

Alan Zheng, Ishmeal Lee, Vikram S Shivakumar

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Frequent Collaborators

8 joint publications

Ben Langmead

1 joint publications

Nathaniel K Brown

1 joint publications

Alan Zheng

1 joint publications

Ishmeal Lee