Mohammed El-Kebir

18PUBLICATIONS
31CO-AUTHORS
Sequence analysisMicrobial taxonomyCancer geneticsPhylogeny and comparative analysisDeep learning
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Publications (18)

|Sep 15, 2026
Summarizing RNA Structural Ensembles via Maximum Agreement Secondary Structures.

|Feb 06, 2026
Deconvolving Phylogenetic Distance Mixtures.

Shayesteh Arasti, Ali Osman Berk Şapcı, Eleonora Rachtman

|Sep 13, 2025
Pharming: Joint Clonal Tree Reconstruction of Single-Nucleotide Variant and Copy Number Aberration Evolution from Single-Cell DNA Sequencing of Tumors.

Leah L Weber, Anna Hart, Idoia Ochoa

|Jul 15, 2025
Fast tumor phylogeny regression via tree-structured dual dynamic programming.

Henri Schmidt, Yuanyuan Qi, Benjamin J Raphael

|Apr 08, 2025
CNRein: an evolution-aware deep reinforcement learning algorithm for single-cell DNA copy number calling.

Stefan Ivanovic, Mohammed El-Kebir

|May 16, 2024
Enforcing Temporal Consistency in Migration History Inference.

Mrinmoy Saha Roddur, Sagi Snir, Mohammed El-Kebir

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Frequent Collaborators

4 joint publications

Yuanyuan Qi

2 joint publications

Chuanyi Zhang

1 joint publications

Nicholas Chia

1 joint publications

Idoia Ochoa